/*******************************************************************************
 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
 * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
 *
 * This file is part of Jalview.
 *
 * Jalview is free software: you can redistribute it and/or
 * modify it under the terms of the GNU General Public License 
 * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
 *
 * Jalview is distributed in the hope that it will be useful, but 
 * WITHOUT ANY WARRANTY; without even the implied warranty 
 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
 * PURPOSE.  See the GNU General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
 *******************************************************************************/
/*
 * This class was automatically generated with 
 * <a href="http://www.castor.org">Castor 1.1</a>, using an XML
 * Schema.
 * $Id$
 */

package jalview.schemabinding.version2.descriptors;

  //---------------------------------/
 //- Imported classes and packages -/
//---------------------------------/

import jalview.schemabinding.version2.JSeq;

/**
 * Class JSeqDescriptor.
 * 
 * @version $Revision$ $Date$
 */
public class JSeqDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {


      //--------------------------/
     //- Class/Member Variables -/
    //--------------------------/

    /**
     * Field _elementDefinition.
     */
    private boolean _elementDefinition;

    /**
     * Field _nsPrefix.
     */
    private java.lang.String _nsPrefix;

    /**
     * Field _nsURI.
     */
    private java.lang.String _nsURI;

    /**
     * Field _xmlName.
     */
    private java.lang.String _xmlName;


      //----------------/
     //- Constructors -/
    //----------------/

    public JSeqDescriptor() {
        super();
        _nsURI = "www.jalview.org";
        _xmlName = "JSeq";
        _elementDefinition = true;
        
        //-- set grouping compositor
        setCompositorAsSequence();
        org.exolab.castor.xml.util.XMLFieldDescriptorImpl  desc           = null;
        org.exolab.castor.mapping.FieldHandler             handler        = null;
        org.exolab.castor.xml.FieldValidator               fieldValidator = null;
        //-- initialize attribute descriptors
        
        //-- _colour
        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_colour", "colour", org.exolab.castor.xml.NodeType.Attribute);
        handler = new org.exolab.castor.xml.XMLFieldHandler() {
            public java.lang.Object getValue( java.lang.Object object ) 
                throws IllegalStateException
            {
                JSeq target = (JSeq) object;
                if (!target.hasColour()) { return null; }
                return new java.lang.Integer(target.getColour());
            }
            public void setValue( java.lang.Object object, java.lang.Object value) 
                throws IllegalStateException, IllegalArgumentException
            {
                try {
                    JSeq target = (JSeq) object;
                    // if null, use delete method for optional primitives 
                    if (value == null) {
                        target.deleteColour();
                        return;
                    }
                    target.setColour( ((java.lang.Integer) value).intValue());
                } catch (java.lang.Exception ex) {
                    throw new IllegalStateException(ex.toString());
                }
            }
            public java.lang.Object newInstance(java.lang.Object parent) {
                return null;
            }
        };
        desc.setHandler(handler);
        desc.setMultivalued(false);
        addFieldDescriptor(desc);
        
        //-- validation code for: _colour
        fieldValidator = new org.exolab.castor.xml.FieldValidator();
        { //-- local scope
            org.exolab.castor.xml.validators.IntValidator typeValidator;
            typeValidator = new org.exolab.castor.xml.validators.IntValidator();
            fieldValidator.setValidator(typeValidator);
            typeValidator.setMinInclusive(-2147483648);
            typeValidator.setMaxInclusive(2147483647);
        }
        desc.setValidator(fieldValidator);
        //-- _start
        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_start", "start", org.exolab.castor.xml.NodeType.Attribute);
        handler = new org.exolab.castor.xml.XMLFieldHandler() {
            public java.lang.Object getValue( java.lang.Object object ) 
                throws IllegalStateException
            {
                JSeq target = (JSeq) object;
                if (!target.hasStart()) { return null; }
                return new java.lang.Integer(target.getStart());
            }
            public void setValue( java.lang.Object object, java.lang.Object value) 
                throws IllegalStateException, IllegalArgumentException
            {
                try {
                    JSeq target = (JSeq) object;
                    // ignore null values for non optional primitives
                    if (value == null) { return; }
                    
                    target.setStart( ((java.lang.Integer) value).intValue());
                } catch (java.lang.Exception ex) {
                    throw new IllegalStateException(ex.toString());
                }
            }
            public java.lang.Object newInstance(java.lang.Object parent) {
                return null;
            }
        };
        desc.setHandler(handler);
        desc.setRequired(true);
        desc.setMultivalued(false);
        addFieldDescriptor(desc);
        
        //-- validation code for: _start
        fieldValidator = new org.exolab.castor.xml.FieldValidator();
        fieldValidator.setMinOccurs(1);
        { //-- local scope
            org.exolab.castor.xml.validators.IntValidator typeValidator;
            typeValidator = new org.exolab.castor.xml.validators.IntValidator();
            fieldValidator.setValidator(typeValidator);
            typeValidator.setMinInclusive(-2147483648);
            typeValidator.setMaxInclusive(2147483647);
        }
        desc.setValidator(fieldValidator);
        //-- _end
        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_end", "end", org.exolab.castor.xml.NodeType.Attribute);
        handler = new org.exolab.castor.xml.XMLFieldHandler() {
            public java.lang.Object getValue( java.lang.Object object ) 
                throws IllegalStateException
            {
                JSeq target = (JSeq) object;
                if (!target.hasEnd()) { return null; }
                return new java.lang.Integer(target.getEnd());
            }
            public void setValue( java.lang.Object object, java.lang.Object value) 
                throws IllegalStateException, IllegalArgumentException
            {
                try {
                    JSeq target = (JSeq) object;
                    // ignore null values for non optional primitives
                    if (value == null) { return; }
                    
                    target.setEnd( ((java.lang.Integer) value).intValue());
                } catch (java.lang.Exception ex) {
                    throw new IllegalStateException(ex.toString());
                }
            }
            public java.lang.Object newInstance(java.lang.Object parent) {
                return null;
            }
        };
        desc.setHandler(handler);
        desc.setRequired(true);
        desc.setMultivalued(false);
        addFieldDescriptor(desc);
        
        //-- validation code for: _end
        fieldValidator = new org.exolab.castor.xml.FieldValidator();
        fieldValidator.setMinOccurs(1);
        { //-- local scope
            org.exolab.castor.xml.validators.IntValidator typeValidator;
            typeValidator = new org.exolab.castor.xml.validators.IntValidator();
            fieldValidator.setValidator(typeValidator);
            typeValidator.setMinInclusive(-2147483648);
            typeValidator.setMaxInclusive(2147483647);
        }
        desc.setValidator(fieldValidator);
        //-- _id
        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_id", "id", org.exolab.castor.xml.NodeType.Attribute);
        desc.setImmutable(true);
        handler = new org.exolab.castor.xml.XMLFieldHandler() {
            public java.lang.Object getValue( java.lang.Object object ) 
                throws IllegalStateException
            {
                JSeq target = (JSeq) object;
                return target.getId();
            }
            public void setValue( java.lang.Object object, java.lang.Object value) 
                throws IllegalStateException, IllegalArgumentException
            {
                try {
                    JSeq target = (JSeq) object;
                    target.setId( (java.lang.String) value);
                } catch (java.lang.Exception ex) {
                    throw new IllegalStateException(ex.toString());
                }
            }
            public java.lang.Object newInstance(java.lang.Object parent) {
                return null;
            }
        };
        desc.setHandler(handler);
        desc.setRequired(true);
        desc.setMultivalued(false);
        addFieldDescriptor(desc);
        
        //-- validation code for: _id
        fieldValidator = new org.exolab.castor.xml.FieldValidator();
        fieldValidator.setMinOccurs(1);
        { //-- local scope
            org.exolab.castor.xml.validators.StringValidator typeValidator;
            typeValidator = new org.exolab.castor.xml.validators.StringValidator();
            fieldValidator.setValidator(typeValidator);
            typeValidator.setWhiteSpace("preserve");
        }
        desc.setValidator(fieldValidator);
        //-- _hidden
        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_hidden", "hidden", org.exolab.castor.xml.NodeType.Attribute);
        handler = new org.exolab.castor.xml.XMLFieldHandler() {
            public java.lang.Object getValue( java.lang.Object object ) 
                throws IllegalStateException
            {
                JSeq target = (JSeq) object;
                if (!target.hasHidden()) { return null; }
                return (target.getHidden() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE);
            }
            public void setValue( java.lang.Object object, java.lang.Object value) 
                throws IllegalStateException, IllegalArgumentException
            {
                try {
                    JSeq target = (JSeq) object;
                    // if null, use delete method for optional primitives 
                    if (value == null) {
                        target.deleteHidden();
                        return;
                    }
                    target.setHidden( ((java.lang.Boolean) value).booleanValue());
                } catch (java.lang.Exception ex) {
                    throw new IllegalStateException(ex.toString());
                }
            }
            public java.lang.Object newInstance(java.lang.Object parent) {
                return null;
            }
        };
        desc.setHandler(handler);
        desc.setMultivalued(false);
        addFieldDescriptor(desc);
        
        //-- validation code for: _hidden
        fieldValidator = new org.exolab.castor.xml.FieldValidator();
        { //-- local scope
            org.exolab.castor.xml.validators.BooleanValidator typeValidator;
            typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();
            fieldValidator.setValidator(typeValidator);
        }
        desc.setValidator(fieldValidator);
        //-- initialize element descriptors
        
        //-- _featuresList
        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Features.class, "_featuresList", "features", org.exolab.castor.xml.NodeType.Element);
        handler = new org.exolab.castor.xml.XMLFieldHandler() {
            public java.lang.Object getValue( java.lang.Object object ) 
                throws IllegalStateException
            {
                JSeq target = (JSeq) object;
                return target.getFeatures();
            }
            public void setValue( java.lang.Object object, java.lang.Object value) 
                throws IllegalStateException, IllegalArgumentException
            {
                try {
                    JSeq target = (JSeq) object;
                    target.addFeatures( (jalview.schemabinding.version2.Features) value);
                } catch (java.lang.Exception ex) {
                    throw new IllegalStateException(ex.toString());
                }
            }
            public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
                try {
                    JSeq target = (JSeq) object;
                    target.removeAllFeatures();
                } catch (java.lang.Exception ex) {
                    throw new IllegalStateException(ex.toString());
                }
            }
            public java.lang.Object newInstance(java.lang.Object parent) {
                return new jalview.schemabinding.version2.Features();
            }
        };
        desc.setHandler(handler);
        desc.setNameSpaceURI("www.jalview.org");
        desc.setMultivalued(true);
        addFieldDescriptor(desc);
        
        //-- validation code for: _featuresList
        fieldValidator = new org.exolab.castor.xml.FieldValidator();
        fieldValidator.setMinOccurs(0);
        { //-- local scope
        }
        desc.setValidator(fieldValidator);
        //-- _pdbidsList
        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Pdbids.class, "_pdbidsList", "pdbids", org.exolab.castor.xml.NodeType.Element);
        handler = new org.exolab.castor.xml.XMLFieldHandler() {
            public java.lang.Object getValue( java.lang.Object object ) 
                throws IllegalStateException
            {
                JSeq target = (JSeq) object;
                return target.getPdbids();
            }
            public void setValue( java.lang.Object object, java.lang.Object value) 
                throws IllegalStateException, IllegalArgumentException
            {
                try {
                    JSeq target = (JSeq) object;
                    target.addPdbids( (jalview.schemabinding.version2.Pdbids) value);
                } catch (java.lang.Exception ex) {
                    throw new IllegalStateException(ex.toString());
                }
            }
            public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
                try {
                    JSeq target = (JSeq) object;
                    target.removeAllPdbids();
                } catch (java.lang.Exception ex) {
                    throw new IllegalStateException(ex.toString());
                }
            }
            public java.lang.Object newInstance(java.lang.Object parent) {
                return new jalview.schemabinding.version2.Pdbids();
            }
        };
        desc.setHandler(handler);
        desc.setNameSpaceURI("www.jalview.org");
        desc.setMultivalued(true);
        addFieldDescriptor(desc);
        
        //-- validation code for: _pdbidsList
        fieldValidator = new org.exolab.castor.xml.FieldValidator();
        fieldValidator.setMinOccurs(0);
        { //-- local scope
        }
        desc.setValidator(fieldValidator);
        //-- _hiddenSequencesList
        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_hiddenSequencesList", "hiddenSequences", org.exolab.castor.xml.NodeType.Element);
        handler = new org.exolab.castor.xml.XMLFieldHandler() {
            public java.lang.Object getValue( java.lang.Object object ) 
                throws IllegalStateException
            {
                JSeq target = (JSeq) object;
                return target.getHiddenSequences();
            }
            public void setValue( java.lang.Object object, java.lang.Object value) 
                throws IllegalStateException, IllegalArgumentException
            {
                try {
                    JSeq target = (JSeq) object;
                    // ignore null values for non optional primitives
                    if (value == null) { return; }
                    
                    target.addHiddenSequences( ((java.lang.Integer) value).intValue());
                } catch (java.lang.Exception ex) {
                    throw new IllegalStateException(ex.toString());
                }
            }
            public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
                try {
                    JSeq target = (JSeq) object;
                    target.removeAllHiddenSequences();
                } catch (java.lang.Exception ex) {
                    throw new IllegalStateException(ex.toString());
                }
            }
            public java.lang.Object newInstance(java.lang.Object parent) {
                return null;
            }
        };
        desc.setHandler(handler);
        desc.setNameSpaceURI("www.jalview.org");
        desc.setMultivalued(true);
        addFieldDescriptor(desc);
        
        //-- validation code for: _hiddenSequencesList
        fieldValidator = new org.exolab.castor.xml.FieldValidator();
        fieldValidator.setMinOccurs(0);
        { //-- local scope
            org.exolab.castor.xml.validators.IntValidator typeValidator;
            typeValidator = new org.exolab.castor.xml.validators.IntValidator();
            fieldValidator.setValidator(typeValidator);
            typeValidator.setMinInclusive(-2147483648);
            typeValidator.setMaxInclusive(2147483647);
        }
        desc.setValidator(fieldValidator);
    }


      //-----------/
     //- Methods -/
    //-----------/

    /**
     * Method getAccessMode.
     * 
     * @return the access mode specified for this class.
     */
    public org.exolab.castor.mapping.AccessMode getAccessMode(
    ) {
        return null;
    }

    /**
     * Method getIdentity.
     * 
     * @return the identity field, null if this class has no
     * identity.
     */
    public org.exolab.castor.mapping.FieldDescriptor getIdentity(
    ) {
        return super.getIdentity();
    }

    /**
     * Method getJavaClass.
     * 
     * @return the Java class represented by this descriptor.
     */
    public java.lang.Class getJavaClass(
    ) {
        return jalview.schemabinding.version2.JSeq.class;
    }

    /**
     * Method getNameSpacePrefix.
     * 
     * @return the namespace prefix to use when marshaling as XML.
     */
    public java.lang.String getNameSpacePrefix(
    ) {
        return _nsPrefix;
    }

    /**
     * Method getNameSpaceURI.
     * 
     * @return the namespace URI used when marshaling and
     * unmarshaling as XML.
     */
    public java.lang.String getNameSpaceURI(
    ) {
        return _nsURI;
    }

    /**
     * Method getValidator.
     * 
     * @return a specific validator for the class described by this
     * ClassDescriptor.
     */
    public org.exolab.castor.xml.TypeValidator getValidator(
    ) {
        return this;
    }

    /**
     * Method getXMLName.
     * 
     * @return the XML Name for the Class being described.
     */
    public java.lang.String getXMLName(
    ) {
        return _xmlName;
    }

    /**
     * Method isElementDefinition.
     * 
     * @return true if XML schema definition of this Class is that
     * of a global
     * element or element with anonymous type definition.
     */
    public boolean isElementDefinition(
    ) {
        return _elementDefinition;
    }

}
